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SMaHT Consortium Information

SMaHT Data

SMaHT Data Overview

Below is an overview of the major data types proposed by each center. The diagram and table below highlight the connections between the data-generating centers, sequencing platforms, experimental assays, variants and other molecular features that will be profiled by the SMaHT Network and made available on the SMaHT Data Portal.

Discover more about SMaHT data by hovering, dragging, and clicking on different parts of the diagram below.

Note: for the best experience, please view the visualization below on a tablet or desktop.

GCC/TTDSequencing PlatformAssay TypeMolecular Features
Technologies and assays are proposed and are not final.

SMaHT Benchmarking Experimental Assays

Below is a summary of experimental assays proposed by each center for the benchmarking experiments.

Discover more about the assays proposed by each center by hovering over the numbers in the table. Hover over assay names for additional information.

Note: for the best experience, please view the visualization below on a tablet or desktop.

BCM
3
1
1
1
1
BROAD
2
1
1
NYGC
2
1
1
1
UWSC
4
1
1
1
WASHU
2
1
1
1
1
BCM1
1
1
UMICH
1
2
1
BCH1
1
1
1
NYU
1
BCH2
1
CWRU
1
DFCI
1
1
MAYO
3
1
STFD
2
1
1
UMASS
1
BROAD1
1
WCNYGC
1

Scroll to the right to view more assays.
Hover over assay types to see additional details.

#

Number of sequencing platforms used in benchmarking experiments.